Current · 2005 · 2004 · 2003 · 2002

Joseph D. Ho, Yana Meltser, Joseph J. Buggy, James T. Palmer, Kyle C. Elrod, Hedy Chan, Kyle D. Mortara, and John R. Somoza.
Expression, Purification, Crystallization and Preliminary X-Ray Diffraction Studies of Human Cathepsin F Complexed with an Irreversible Vinyl Sulfone Inhibitor.
Acta Crystallographica. Section D: Biological Crystallography, 58 (12): 2187-2190, 2002.

W. J. Tremaine, A. Brzezinski, J. A. Katz, D. C. Wolf, T. J. Fleming, J. Mordenti, L. C. Strenkoski-Nix, M. C. Kurth, & the Axys Ulcerative Colitis Study Group, Charles Barish, Aaron Brzezinski, Fred C. Fowler, Michael Gaspari, Jeffry A. Katz, George Koval, Dennis Riff, Michael Safdi, Bruce Salzberg, William J. Tremaine, and Douglas C. Wolf.
Treatment of Mildly to Moderately Active Ulcerative Colitis with a Tryptase Inhibitor (Apc 2059): An Open-Label Pilot Study.
Alimentary Pharmacology and Therapeutics, 16 (3): 407-413, 2002.

Daniel Fasulo, Aaron Halpern, Ian Dew, and Clark Mobarry.
Efficiently Detecting Polymorphisms During the Fragment Assembly Process.
Bioinformatics, 18 (Suppl 1): S294-S302, 2002.

E Althaus, A Caprara, HP Lenhof, and K Reinert.
Multiple Sequence Alignment with Arbitrary Gap Costs: Computing an Optimal Solution Using Polyhedral Combinatorics.
Bioinformatics, 18 (Suppl 2): S4-S16, 2002.

Robert M. Rydzewski, Clifford Bryant, Renata Oballa, Gregg Wesolowski, Sevgi B. Rodan, Kathryn E. Bass, and Darren H. Wong.
Peptidic 1-Cyanopyrrolidines: Synthesis and Sar of a Series of Potent, Selective Cathepsin Inhibitors.
Bioorganic & Medicinal Chemistry, 10 (10): 3277-3284, 2002.

David Sperandio, Anthony R. Gangloff, Joane Litvak, Richard Goldsmith, Jason M. Hataye, Vivian R. Wang, Emma J. Shelton, Kyle Elrod, James W. Janc, James M. Clark, Ken Rice, Steve Weinheimer, Kap-Sun Yeung, Nicholas A. Meanwell, Dennis Hernandez, Andrew J. Staab, Brian L. Venables, and Jeffrey R. Spencer.
Highly Potent Non-Peptidic Inhibitors of the Hcv Ns3/Ns4a Serine Protease.
Bioorganic & Medicinal Chemistry Letters, 12 (21): 3129-3133, 2002.

Jeffrey R. Spencer, Danny McGee, Darin Allen, Bradley A. Katz, Christine Luong, Martin Sendzik, Neil Squires, and Richard L. Mackman.
4-Aminoarylguanidine and 4-Aminobenzamidine Derivatives as Potent and Selective Urokinase-Type Plasminogen Activator Inhibitors.
Bioorganic & Medicinal Chemistry Letters, 12 (15): 2023-2026, 2002.

Rohan V. Mendonca, Shankar Venkatraman, and James T. Palmer.
Novel Route to the Synthesis of Peptides Containing 2-Amino-1'- Hydroxymethyl Ketones and Their Application as Cathepsin K Inhibitors.
Bioorganic & Medicinal Chemistry Letters, 12 (20): 2887-2891, 2002.

Richard L. Mackman, Hon C. Hui, J. Guy Breitenbucher, Bradley A. Katz, Christine Luong, Arnold Martelli, Danny McGee, Kesavan Radika, Martin Sendzik, Jeffrey R. Spencer, Paul A. Sprengeler, James Tario, Erik Verner, and Jing Wang.
2-(2-Hydroxy-3-Alkoxyphenyl)-1h-Benzimidazole-5-Carboxamidine Derivatives as Potent and Selective Urokinase-Type Plasminogen Activator Inhibitors.
Bioorganic & Medicinal Chemistry Letters, 12 (15): 2019-2022, 2002.

Brian E. Cathers, Cynthia Barrett, James T. Palmer, and Robert M. Rydzewski.
Ph Dependence of Inhibitors Targeting the Occluding Loop of Cathepsin B.
Bioorganic Chemistry, 30 (4): 264-275, 2002.

Ross Lippert, Russell Schwartz, Giuseppe Lancia, and Sorin Istrail.
Algorithmic Strategies for the Single Nucleotide Polymorphism Haplotype Assembly Problem.
Briefings in Bioinformatics, 3 (1): 23-31, 2002.

Sridhar Hannenhalli, Earl Hubbell, Robert Lipshutz, and Pavel A. Pevzner.
Combinatorial Algorithms for Design of DNA Arrays.
In: Joerg Hoheisel (ed.), Chip Technology, Advances in Biochemical Engineering Biotechnology Vol. 77, pp. 1-19. New York: Springer Verlag New York Inc., 2002.

Trevor Woodage, J. Craig Venter, and Samuel Broder.
Application of the Human Genome to Obstetrics and Gynecology.
Clinical Obstetrics and Gynecology, 45 (3): 711-729; discussion 730-732, 2002.

Bruno Domon, Kim Alving, Tao He, Terence E. Ryan, and Scott D. Patterson.
Enabling Parallel Protein Analysis through Mass Spectrometry.
Current Opinion in Molecular Therapeutics, 4 (6): 577-586, 2002.

Predicting Drug-Likeness: Why and How?
Current Topics in Medicinal Chemistry, 2 (12): 1273-1286, 2002.

Peter Sabbatini and Frank McCormick.
Mdmx Inhibits the P300/Cbp-Mediated Acetylation of P53.
DNA and Cell Biology, 21 (7): 519-525, 2002.

Samuel Broder, Stephen L. Hoffman, and Peter J. Hotez.
Cures for the Third World's Problems: The Application of Genomics to the Diseases Plaguing the Developing World May Have Huge Medical and Economic Benefits for Those Countries and Might Even Prevent Armed Conflict.
EMBO Reports, 3 (9): 806-812, 2002.

Susan E. Celniker, David A. Wheeler, Brent Kronmiller, Joseph W. Carlson, Aaron Halpern, Sandeep Patel, Mark Adams, Mark Champe, Shannon P. Dugan, Erwin Frise, Ann Hodgson, Reed A. George, Roger A Hoskins, Todd Laverty, Donna M Muzny, Catherine R. Nelson, Joanne M. Pacleb, Soo Park, Barret D. Pfeiffer, Stephen Richards, Erica J. Sodergren, Robert Svirskas, Paul E. Tabor, Kenneth Wan, Mark Stapleton, Granger G. Sutton, Craig Venter, George Weinstock, Steven E. Scherer, Eugene W. Myers, Richard A. Gibbs and Gerald M. Rubin.
Finishing a Whole Genome.
Genome Biology, 3 (12): research0079.0071 - 0079.0014, 2002.

Richard J. Mural, Eugene W. Myers, Hamilton Smith, George L. Gabor Miklos, Ron Wides, Aaron Halpern, Peter W. Li, Granger Sutton, Joseph H. Nadeau, Steven L. Salzberg, Robert Holt, Cheryl A. Evans, Fu Lu, Kendra Biddick, Vivien Bonazzi, Arthur Delcher, Xiangqun H. Zheng, Mark Yandell, Doug Rusch, William Majoros, Jeff Hoover, Jian Wang, J. Craig Venter, and Mark D. Adams.
A Preliminary Comparison of the Mouse and Human Genomes.
International Congress Series, 1246 (Genome Science: Towards a New Paradigm?): 169-181, 2002.

Mengxiang Tang, Michael Waterman, and Shibu Yooseph.
Zinc Finger Gene Clusters and Tandem Gene Duplication.
Journal of Computational Biology, 9 (2): 429-446, 2002.

Alan M. Frieze and Bjarni V. Halldorsson.
Optimal Sequencing by Hybridization in Rounds.
Journal of Computational Biology, 9 (2): 355-369, 2002.

John R. Somoza, James T. Palmer, and D. Ho Joseph.
The Crystal Structure of Human Cathepsin F and Its Implications for the Development of Novel Immunomodulators.
Journal of Molecular Biology, 322 (3): 559-568, 2002.

Bradley A. Katz, Jeffrey R. Spencer, Kyle Elrod, Christine Luong, Richard L. Mackman, Mark Rice, Paul A. Sprengeler, Darin Allen, and James Janc.
Contribution of Multicentered Short Hydrogen Bond Arrays to Potency of Active Site-Directed Serine Protease Inhibitors.
Journal of the American Chemical Society, 124 (39): 11657-11668, 2002.

Denise L. Doolan and Stephen L. Hoffman.
Nucleic Acid Vaccines against Malaria.
In: Peter Perlmann and Marita Troye Blomberg (eds.), Malaria Immunology, 2nd revised and enlarged edition, Chemical Immunology Vol. 80, pp. 308-321. New York: S. Karger Publishers Inc., 2002.

Samuel Levy and Sridhar Hannenhalli.
Identification of Transcription Factor Binding Sites in the Human Genome Sequence.
Mammalian Genome, 13 (9): 510-514, 2002.

Stephen L. Hoffman, G. Mani Subramanian, Frank H. Collins, and J. Craig Venter.
Plasmodium, Human and Anopheles Genomics and Malaria.
Nature, 415 (6872): 702-709, 2002.

Anthony Kerlavage, Vivien Bonazzi, Matteo di Tommaso, Charles Lawrence, Peter Li, Frank Mayberry, Richard Mural, Marc Nodell, Mark Yandell, Jinghui Zhang, and Paul Thomas.
The Celera Discovery System.
Nucleic Acids Research, 30 (1): 129-136, 2002.

Sridhar Hannenhalli and Samuel Levy.
Predicting Transcription Factor Synergism.
Nucleic Acids Research, 30 (19): 4278-4284, 2002.

Ross A. Lippert, Haiyan Huang, and Michael S. Waterman.
Distributional Regimes for the Number of K-Word Matches between Two Random Sequences.
Proceedings of the National Academy of Sciences of the United States of America, 99 (22): 13980-13989, 2002.

Richard J. Mural, Mark D. Adams, Eugene W. Myers, Hamilton O. Smith, et. al.
A Comparison of Whole-Genome Shotgun-Derived Mouse Chromosome 16 and the Human Genome.
Science, 296 (5573): 1661-1671, 2002.

Robert A. Holt, G. Mani Subramanian, Aaron Halpern, Granger G. Sutton, et. al.
The Genome Sequence of the Malaria Mosquito Anopheles Gambiae.
Science, 298 (5591): 129-149, 2002.

Samuel Aparicio, Jarrod Chapman, Elia Stupka, Nik Putnam, Jer-ming Chia, Paramvir Dehal, Alan Christoffels, Sam Rash, Shawn Hoon, Arian Smit, Maarten D. Sollewijn Gelpke, Jared Roach, Tania Oh, Isaac Y. Ho, Marie Wong, Chris Detter, Frans Verhoef, Paul Predki, Alice Tay, Susan Lucas, Paul Richardson, Sarah F. Smith, Melody S. Clark, Yvonne J. K. Edwards, Norman Doggett, Andrey Zharkikh, Sean V. Tavtigian, Dmitry Pruss, Mary Barnstead, Cheryl Evans, Holly Baden, Justin Powell, Gustavo Glusman, Lee Rowen, Leroy Hood, Y. H. Tan, Greg Elgar, Trevor Hawkins, Byrappa Venkatesh, Daniel Rokhsar, and Sydney Brenner.
Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu Rubripes.
Science, 297 (5585): 1301-1310, 2002.

Jeffrey A. Bailey, Zhiping Gu, Royden A. Clark, Knut Reinert, Rhea V. Samonte, Stuart Schwartz, Mark D. Adams, Eugene W. Myers, Peter W. Li, and Evan E. Eichler.
Recent Segmental Duplications in the Human Genome.
Science, 297 (5583): 1003-1007, 2002.